Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_27380Serine--pyruvate transaminase (Serine--pyruvate aminotransferase)-like protein. (394 aa)    
Predicted Functional Partners:
bla
Cephalosporinase.
       0.570
Rta_27400
Conserved hypothetical protein.
       0.570
alaS
Candidate alanyl-tRNA synthetase (Alanine--tRNA ligase); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.557
purD
Phosphoribosylglycinamide synthetase; Belongs to the GARS family.
  
    0.535
Rta_24240
Candidate hydroxyacid oxidase (Glycolate oxidase).
  
 0.521
Rta_27130
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases-like protein.
  
 0.521
lldD
Candidate L-lactate dehydrogenase (Cytochrome).
  
 0.521
Rta_29390
Candidate bifunctional protein : L-lactate dehydrogenase;Citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
  
 0.521
Rta_27410
PhnB protein-like protein.
     
 0.502
Rta_27280
Polymyxin resistance protein pmrH; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.498
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.