Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Rta_27750A-glycosyltransferase, Glycosyltransferase Family 4-like protein. (328 aa)    
Predicted Functional Partners:
Rta_27730
CyaD protein-like protein.
 
     0.560
Rta_27720
Conserved hypothetical protein.
  
   
 0.491
Rta_30420
MelG protein (non-ribosomal peptide synthetase)-like protein.
 
  
 0.466
Rta_08750
A-glycosyltransferase, Glycosyltransferase Family 4-like protein.
  
     0.438
Rta_10900
Candidate succinoglycan transport protein.
  
  
 0.428
Rta_27740
Candidate ABC type bacteriocin/lantibiotic exporters, ATP-binding and permease domains.
  
  
 0.424
rmlA1
dTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.422
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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