Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Rta_28280A-glycosyltransferase, Glycosyltransferase Family 4-like protein. (374 aa)    
Predicted Functional Partners:
Rta_28290
Candidate sugar-1-phosphate transferase, membrane protein.
 
  
 0.893
galE-2
UDP- galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.817
Rta_28260
Conserved hypothetical protein.
  
    0.784
Rta_28250
Conserved hypothetical protein.
       0.566
Rta_10900
Candidate succinoglycan transport protein.
 
  
 0.515
Rta_10880
Candidate b-glycosyltransferase, Glycosyltransferase Family 2.
 
  
 0.477
Rta_10860
Candidate b-glycosyltransferase, Glycosyltransferase Family 2.
 
  
 0.467
Rta_10770
Candidate sugar-1-phosphate transferase, membrane protein.
 
  
 0.463
Rta_08965
Polysaccharide deacetylase, carbohydrate Esterase Family 4-like protein.
   
 0.429
rmlA1
dTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.422
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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