Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_29030Conserved hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily. (111 aa)    
Predicted Functional Partners:
Rta_20200
BolA protein-like protein; Belongs to the BolA/IbaG family.
 
 
 0.921
Rta_08200
Conserved hypothetical protein; Belongs to the BolA/IbaG family.
 
 
 
 0.809
grxC
Candidate glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.798
prfA
Candidate peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
    
  0.733
hemK
Protein-(glutamine-N5) MTase hemK; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.703
Rta_34300
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase-like protein.
  
    0.612
iscA
Candidate Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
 
 0.608
gshB
Candidate glutathione synthetase (glutathione synthase); Belongs to the prokaryotic GSH synthase family.
  
   
 0.567
gloB
Candidate hydroxyacylglutathione hydrolase (Glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
 0.553
erpA
Candidate Fe-S protein; Required for insertion of 4Fe-4S clusters.
  
 0.552
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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