Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctQ-9Candidate large permease component. (432 aa)    
Predicted Functional Partners:
dctM-9
Candidate small permease component.
 
 
 0.974
dctP-9
Candidate periplasmic component.
  
 0.931
dctP-3
Candidate periplasmic component.
  
 0.829
dctM-3
Candidate small permease component.
 
 
 0.823
dctP-4
Candidate periplasmic component.
  
 0.817
dctP-6
Candidate periplasmic component.
 
  
 0.799
dctP-2
Candidate periplasmic component.
 
  
 0.787
pdhA
Candidate pyruvate dehydrogenase E1 component, alpha subunit.
  
    0.777
pdhB
Candidate pyruvate dehydrogenase E1 component, beta subunit.
       0.773
dctM-4
Candidate small permease component.
 
 
 0.523
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.