Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nagACandidate N-acetylglucosamine 6-phosphate deacetylase (NagA), Carbohydrate Esterase Family 9. (372 aa)    
Predicted Functional Partners:
Rta_29974
Conserved hypothetical protein.
 
 
 0.993
Rta_30025
N-acetylglucosamine kinase-like protein.
 
 
 0.973
glmS
Candidate Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.937
glmM
Candidate phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.913
Rta_29990
Conserved hypothetical protein.
 
     0.813
Rta_29980
Candidate ABC type sugar transport system, ATP-binding component; Belongs to the ABC transporter superfamily.
 
     0.811
Rta_30000
Candidate ABC type sugar transport system, permease component.
 
   
 0.742
Rta_33790
Conserved hypothetical protein.
  
    0.711
Rta_30010
Candidate ABC type sugar transport system, permease component.
 
   
 0.671
Rta_21680
Transcriptional regulator, GntR family-like protein.
 
  
 0.614
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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