Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Rta_30780Carboxy-terminal processing protease precursor (C- terminal processing protease)-like protein; Belongs to the peptidase S41A family. (479 aa)    
Predicted Functional Partners:
gpmA
Candidate 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (Phosphoglyceromutase); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
  
 0.732
Rta_30810
Candidate molybdopterin and thiamine biosynthesis protein.
  
    0.681
Rta_04900
Hypothetical protein.
  
 
 0.580
Rta_33250
Conserved hypothetical protein.
  
   0.524
Rta_30760
Conserved hypothetical protein.
  
    0.523
grxC
Candidate glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
     
 0.519
Rta_30790
Hypothetical protein.
       0.481
Rta_30800
Hypothetical protein.
       0.481
Rta_04600
Conserved hypothetical protein.
    
 
 0.477
Rta_18710
Conserved hypothetical protein.
    
 
 0.477
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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