Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rta_08960 | Rta_31080 | Rta_08960 | Rta_31080 | Conserved hypothetical protein. | ATP-dependent DNA ligase-like protein. | 0.829 |
Rta_08960 | Rta_31100 | Rta_08960 | Rta_31100 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.802 |
Rta_08960 | lhr | Rta_08960 | Rta_30920 | Conserved hypothetical protein. | Candidate large helicase-related protein. | 0.853 |
Rta_31080 | Rta_08960 | Rta_31080 | Rta_08960 | ATP-dependent DNA ligase-like protein. | Conserved hypothetical protein. | 0.829 |
Rta_31080 | Rta_31100 | Rta_31080 | Rta_31100 | ATP-dependent DNA ligase-like protein. | Conserved hypothetical protein. | 0.993 |
Rta_31080 | Rta_31120 | Rta_31080 | Rta_31120 | ATP-dependent DNA ligase-like protein. | Conserved hypothetical protein. | 0.782 |
Rta_31080 | Rta_31140 | Rta_31080 | Rta_31140 | ATP-dependent DNA ligase-like protein. | Cytotoxic protein ccdB (LetB protein)-like protein. | 0.781 |
Rta_31080 | clsB | Rta_31080 | Rta_31110 | ATP-dependent DNA ligase-like protein. | Cardiolipin synthetase (Cardiolipin synthase)-like protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.780 |
Rta_31080 | dnaN | Rta_31080 | Rta_00020 | ATP-dependent DNA ligase-like protein. | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | 0.898 |
Rta_31080 | lhr | Rta_31080 | Rta_30920 | ATP-dependent DNA ligase-like protein. | Candidate large helicase-related protein. | 0.810 |
Rta_31080 | ligC | Rta_31080 | Rta_20930 | ATP-dependent DNA ligase-like protein. | Candidate DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.912 |
Rta_31080 | nudB | Rta_31080 | Rta_31130 | ATP-dependent DNA ligase-like protein. | Candidate dATP pyrophosphohydrolase. | 0.802 |
Rta_31080 | polA | Rta_31080 | Rta_12840 | ATP-dependent DNA ligase-like protein. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.844 |
Rta_31100 | Rta_08960 | Rta_31100 | Rta_08960 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.802 |
Rta_31100 | Rta_31080 | Rta_31100 | Rta_31080 | Conserved hypothetical protein. | ATP-dependent DNA ligase-like protein. | 0.993 |
Rta_31100 | Rta_31120 | Rta_31100 | Rta_31120 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.782 |
Rta_31100 | Rta_31140 | Rta_31100 | Rta_31140 | Conserved hypothetical protein. | Cytotoxic protein ccdB (LetB protein)-like protein. | 0.781 |
Rta_31100 | clsB | Rta_31100 | Rta_31110 | Conserved hypothetical protein. | Cardiolipin synthetase (Cardiolipin synthase)-like protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.781 |
Rta_31100 | lhr | Rta_31100 | Rta_30920 | Conserved hypothetical protein. | Candidate large helicase-related protein. | 0.832 |
Rta_31100 | nudB | Rta_31100 | Rta_31130 | Conserved hypothetical protein. | Candidate dATP pyrophosphohydrolase. | 0.802 |
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