Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
qorCandidate quinone oxidoreductase (NADPH:quinone reductase). (329 aa)    
Predicted Functional Partners:
Rta_04840
Polyketide synthase protein-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.922
Rta_30410
Polyketide synthase-like protein.
 
 
 0.814
Rta_31830
Nudix hydrolase-like protein.
   
   0.783
Rta_31850
Candidate transporter.
 
     0.600
Rta_33810
Candidate nodulation protein N.
 
 
 0.523
Rta_31820
Candidate response regulator, CheY.
       0.476
Rta_23800
Conserved hypothetical protein.
 
 
 0.464
Rta_19990
NADP-dependent oxidoreductases-like protein.
 
 
 0.456
Rta_30420
MelG protein (non-ribosomal peptide synthetase)-like protein.
  
  
 0.437
Rta_31860
Conserved hypothetical protein.
     
 0.426
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (34%) [HD]