Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_31980Conserved hypothetical protein. (335 aa)    
Predicted Functional Partners:
Rta_31990
ATPases-like protein.
       0.697
Rta_31510
Serine proteases-like protein.
  
     0.616
Rta_28470
Sigma-E factor negative regulatory protein-like protein.
  
 
 0.601
Rta_32000
Conserved hypothetical protein.
       0.592
Rta_31970
Deoxyribonuclease protein-like protein.
     
 0.558
glpK
ATP:glycerol 3-phosphotransferase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.555
Rta_32010
Conserved hypothetical protein.
 
    0.500
Rta_01630
Candidate histidine kinase, atypical unorthodox.
  
  
 0.450
Rta_04690
Conserved hypothetical protein.
  
 0.446
Rta_19800
Candidate ankyrin repeat harboring protein.
  
 0.442
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.