| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_25370 | recJ | Rta_25370 | Rta_32070 | DNA internalization-related competence protein-like protein. | Candidate single-stranded DNA-specific exonuclease. | 0.534 |
| Rta_25370 | recQ2 | Rta_25370 | Rta_04380 | DNA internalization-related competence protein-like protein. | Candidate ATP-dependent DNA helicase. | 0.416 |
| Rta_32050 | Rta_32060 | Rta_32050 | Rta_32060 | Candidate ABC transporter, permease component. | Conserved hypothetical protein. | 0.649 |
| Rta_32050 | lolD | Rta_32050 | Rta_32040 | Candidate ABC transporter, permease component. | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.994 |
| Rta_32050 | recJ | Rta_32050 | Rta_32070 | Candidate ABC transporter, permease component. | Candidate single-stranded DNA-specific exonuclease. | 0.655 |
| Rta_32060 | Rta_32050 | Rta_32060 | Rta_32050 | Conserved hypothetical protein. | Candidate ABC transporter, permease component. | 0.649 |
| Rta_32060 | lolD | Rta_32060 | Rta_32040 | Conserved hypothetical protein. | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.594 |
| Rta_32060 | recJ | Rta_32060 | Rta_32070 | Conserved hypothetical protein. | Candidate single-stranded DNA-specific exonuclease. | 0.835 |
| Rta_32400 | recJ | Rta_32400 | Rta_32070 | Conserved hypothetical protein. | Candidate single-stranded DNA-specific exonuclease. | 0.846 |
| dnaN | mutS | Rta_00020 | Rta_26860 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate DNA mismatch repair ATPase protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.972 |
| dnaN | polA | Rta_00020 | Rta_12840 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.989 |
| dnaN | recJ | Rta_00020 | Rta_32070 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate single-stranded DNA-specific exonuclease. | 0.583 |
| dnaN | recQ2 | Rta_00020 | Rta_04380 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate ATP-dependent DNA helicase. | 0.604 |
| lolD | Rta_32050 | Rta_32040 | Rta_32050 | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Candidate ABC transporter, permease component. | 0.994 |
| lolD | Rta_32060 | Rta_32040 | Rta_32060 | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Conserved hypothetical protein. | 0.594 |
| lolD | recJ | Rta_32040 | Rta_32070 | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Candidate single-stranded DNA-specific exonuclease. | 0.635 |
| mutS | dnaN | Rta_26860 | Rta_00020 | Candidate DNA mismatch repair ATPase protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | 0.972 |
| mutS | polA | Rta_26860 | Rta_12840 | Candidate DNA mismatch repair ATPase protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.972 |
| mutS | priA | Rta_26860 | Rta_04990 | Candidate DNA mismatch repair ATPase protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Candidate primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.501 |
| mutS | recJ | Rta_26860 | Rta_32070 | Candidate DNA mismatch repair ATPase protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Candidate single-stranded DNA-specific exonuclease. | 0.569 |
STRING v12.5 is now available!
