Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_32410Animal glycogenin, Glycosyltransferase Family 8-like protein. (283 aa)    
Predicted Functional Partners:
galU
Candidate UTP--glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase); (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase).
    
 0.906
Rta_36500
Candidate trehalose-6-phosphate synthase, Glycosyltransferase Family 20; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
     
  0.900
glgC
Candidate glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase).
  
 
  0.807
Rta_32390
Candidate xanthine dehydrogenase large subunit.
 
     0.516
Rta_32380
Candidate xanthine dehydrogenase small subunit.
 
     0.512
Rta_32400
Conserved hypothetical protein.
       0.456
metF
Candidate 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
    0.413
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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