Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctP-10Candidate periplasmic component. (324 aa)    
Predicted Functional Partners:
dctM-10
Candidate small permease component.
 
  
 0.960
fcbT3-3
Candidate large permease component.
 
     0.935
Rta_13920
Conserved hypothetical protein.
 
     0.701
Rta_13910
Conserved hypothetical protein.
 
     0.689
Rta_32440
Indolepyruvate ferredoxin oxidoreductase alpha subunit-like protein.
 
     0.634
Rta_32450
Indolepyruvate ferredoxin oxidoreductase beta subunit-like protein.
 
     0.611
Rta_32480
Conserved hypothetical protein.
       0.576
dctM
Candidate small permease component.
 
  
 0.545
Rta_32520
Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.
       0.534
dctQ
Candidate large permease component.
 
  
 0.533
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.