Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Rta_32660N-carbamoyl-L-amino-acid hydrolase-like protein. (595 aa)    
Predicted Functional Partners:
Rta_32650
GlcNAc deacetylase, Carbohydrate Esterase Family 4-like protein.
    0.948
Rta_32640
Candidate transthyretin protein precursor; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 0.935
Rta_32670
N-acetylornithinase.
 
   
 0.928
Rta_36600
Beta-alanine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.922
Rta_23090
Aldehyde dehydrogenase (NAD+)-like protein; Belongs to the aldehyde dehydrogenase family.
    
 0.903
Rta_16200
long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)-like protein.
   
 
  0.801
Rta_32390
Candidate xanthine dehydrogenase large subunit.
 
     0.681
Rta_32380
Candidate xanthine dehydrogenase small subunit.
 
     0.619
Rta_32590
Candidate membrane protein.
 
    0.614
uraA
Candidate xanthine/uracil permease.
  
  
 0.538
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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