Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Rta_32940Serine/threonine protein phosphatase-like protein. (300 aa)    
Predicted Functional Partners:
Rta_32950
Protein kinase (serine/threonine-protein kinase)-like protein.
 
 
 0.967
Rta_19900
Protein kinase (serine/threonine-protein kinase)-like protein.
 
 
 0.838
Rta_37390
Protein kinase (serine/threonine-protein kinase)-like protein.
 
 
 0.838
Rta_17870
Protein kinase (serine/threonine-protein kinase)-like protein.
 
 
 0.836
Rta_18700
Candidate dihydrolipoyl dehydrogenase (Dihydrolipoamide dehydrogenase).
  
 0.755
Rta_37370
FHA-domain-containing proteins-like protein.
 
 
 0.741
Rta_00880
Conserved hypothetical protein.
    
 0.677
Rta_33230
Conserved hypothetical protein.
  
     0.675
Rta_28420
Conserved hypothetical protein.
  
     0.664
pilI-2
Candidate twitching motility protein, chemotaxis protein cheW.
  
     0.641
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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