Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ctaGCandidate cytochrome C oxidase assembly protein. (195 aa)    
Predicted Functional Partners:
ctaB
Candidate protoheme IX farnesyltransferase (Heme O synthase), membrane protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.994
Rta_33670
Cytochrome AA3 controlling protein, membrane protein-like protein.
 
 0.993
ctaC-2
Candidate cytochrome c oxidase polypeptide II precursor (Cytochrome aa3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.989
ctaE
Oxidase AA(3) subunit 3; membrane protein.
 
  
 0.977
ctaD-2
Candidate cytochrome c oxidase polypeptide I (Cytochrome AA3 subunit 1); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 
 0.963
ctaD
Candidate Cytochrome c oxidase polypeptide I (Cytochrome AA3 subunit 1).
 
 
 0.961
Rta_33690
Cytochrome oxidase complex biogenesis factor-like protein.
 
 0.949
Rta_33680
Conserved hypothetical protein.
 
 0.910
ctaC
Candidate Cytochrome c oxidase polypeptide II precursor (Cytochrome aa3 subunit 2).
 
 
 0.879
Rta_33720
Conserved hypothetical protein.
 
    0.860
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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