Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_34050Candidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
Rta_34040
Candidate ABC type Fe3+ transport system, permease component with duplicated domains.
 
 0.988
Rta_15870
Candidate ABC type Fe3+ transport system, permease component with duplicated domains.
 
 0.957
Rta_24660
Candidate ABC type Fe3+ transport system.
 
 
 0.957
afuC
Candidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system; Belongs to the ABC transporter superfamily.
  
  
 
0.916
Rta_15860
Candidate ABC type Fe3+ transport system, periplasmic component.
  
 
 0.844
Rta_13310
Candidate ABC type molybdate transport system, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.569
Rta_25370
DNA internalization-related competence protein-like protein.
     
 0.502
Rta_29980
Candidate ABC type sugar transport system, ATP-binding component; Belongs to the ABC transporter superfamily.
 
  
 
0.494
Rta_31300
Candidate ABC type sugar transport system, ATP-binding component; Belongs to the ABC transporter superfamily.
 
  
 
0.465
cysA
Candidate ABC type sulfate/molybdate transport systems, ATP-binding component; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
  
 
0.460
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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