Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dsbCCandidate Thiol:disulfide interchange protein dsbC precursor; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (237 aa)    
Predicted Functional Partners:
Rta_34320
Protease with the C-terminal PDZ domain-like protein.
 
     0.792
Rta_34300
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase-like protein.
     
 0.747
dsbB
Candidate disulfide oxidoreductase, membrane protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
 
 0.736
Rta_34330
Conserved hypothetical protein.
  
    0.683
Rta_18960
Conserved hypothetical protein.
  
    0.599
Rta_35650
Conserved hypothetical protein.
  
     0.595
Rta_05080
Thiol:disulfide reductase (thiol:disulfide interchange protein)-like protein.
  
 
 0.579
lolA
Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
   
 0.576
dsbA
Candidate disulfide oxidoreductase.
  
  
 0.559
Rta_34290
Conserved hypothetical protein.
       0.551
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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