Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ohrCandidate organic hydroperoxide resistance protein. (138 aa)    
Predicted Functional Partners:
ohrR
Candidate transcriptional regulator OhrR (Organic hydroperoxide resistance transcriptional regulator), MarR family.
  
 0.967
katE
Candidate hydroperoxidase II.
  
  
 0.778
katE-3
Candidate hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.778
srkA
Conserved hypothetical protein; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.
       0.699
Rta_23440
DNA-binding ferritin-like protein-like protein; Belongs to the Dps family.
  
  
 0.621
Rta_36250
DNA-binding ferritin-like protein-like protein; Belongs to the Dps family.
  
  
 0.621
Rta_34690
Conserved hypothetical protein.
       0.567
Rta_23800
Conserved hypothetical protein.
  
  
 0.554
Rta_24970
Serine protein kinase-like protein.
   
    0.527
nodI
Candidate ABC type multidrug transport system, ATP-binding component; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.
     
 0.515
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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