Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_34960Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (358 aa)    
Predicted Functional Partners:
Rta_34950
Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
Rta_34940
Candidate ABC type branched chain amino acid transport systems, ATP-binding component.
  
 0.968
Rta_34930
long-chain-fatty-acid--CoA ligase-like protein.
 
    0.948
Rta_34970
Candidate ABC type branched chain amino acid transport systems, periplasmic component.
 
  
 0.942
Rta_34980
Candidate ABC type branched chain amino acid transport systems, ATP-binding component.
 
  
 0.919
Rta_34990
Phenylacetate-coenzyme A ligase (Phenylacetyl-CoA ligase)-like protein.
 
    0.869
Rta_31610
Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.798
Rta_31590
Candidate ABC type branched chain amino acid transport systems, ATP-binding component.
  
 0.793
Rta_12260
Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.767
Rta_12240
Candidate ABC type branched chain amino acid transport systems, ATP-binding component.
  
 0.732
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.