Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gspH-2Candidate pseudopilin, general secretion pathway protein H precursor (PilD-dependent protein), component of type II secretion system. (150 aa)    
Predicted Functional Partners:
gspK
Candidate pseudopilin, general secretion pathway protein K precursor (PilD-dependent protein), component of type II secretion system.
  
 
 0.938
gspJ
Candidate pseudopilin, general secretion pathway protein J precursor (PilD-dependent protein), component of type II secretion system.
  
 
 0.928
gspI
Candidate pseudopilin, general secretion pathway protein I precursor (PilD-dependent protein), component of type II secretion system.
  
  
 0.906
gspG-2
Candidate pseudopilin, general secretion pathway protein G precursor (PilD-dependent protein), component of type II secretion system.
  
  
 0.841
gspE-2
Candidate general secretion pathway protein E (Type II traffic warden ATPase), component of type II secretion system.
  
 
 0.774
gspL
Candidate general secretion pathway protein L, component of type II secretion system.
  
  
 0.770
gspM
Candidate general secretion pathway protein M, component of type II secretion system.
  
  
 0.718
gspC
Candidate general secretion pathway protein C, component of type II secretion system.
     
 0.657
gspD-2
Candidate secretin, general secretion pathway protein D, component of type II secretion system.
  
  
 0.635
Rta_25370
DNA internalization-related competence protein-like protein.
  
  
 0.569
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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