Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
gspCCandidate general secretion pathway protein C, component of type II secretion system. (267 aa)    
Predicted Functional Partners:
gspL
Candidate general secretion pathway protein L, component of type II secretion system.
 
   
 0.954
gspD-2
Candidate secretin, general secretion pathway protein D, component of type II secretion system.
 
   
 0.942
gspK
Candidate pseudopilin, general secretion pathway protein K precursor (PilD-dependent protein), component of type II secretion system.
 
   
 0.929
gspI
Candidate pseudopilin, general secretion pathway protein I precursor (PilD-dependent protein), component of type II secretion system.
 
   
 0.924
gspJ
Candidate pseudopilin, general secretion pathway protein J precursor (PilD-dependent protein), component of type II secretion system.
 
   
 0.924
gspE-2
Candidate general secretion pathway protein E (Type II traffic warden ATPase), component of type II secretion system.
 
  
 0.848
gspM
Candidate general secretion pathway protein M, component of type II secretion system.
     
 0.809
Rta_20940
Conserved hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.740
Rta_33770
Conserved hypothetical protein.
  
     0.732
Rta_37280
Conserved hypothetical protein.
  
     0.715
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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