Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_36600Beta-alanine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)    
Predicted Functional Partners:
Rta_02980
Candidate NAD-dependent aldehyde dehydrogenase.
 
  
 0.936
Rta_32660
N-carbamoyl-L-amino-acid hydrolase-like protein.
 
 
 0.922
Rta_23090
Aldehyde dehydrogenase (NAD+)-like protein; Belongs to the aldehyde dehydrogenase family.
    
 0.908
Rta_04750
2-hydroxy-3-oxopropionate reductase-like protein.
     
  0.900
Rta_05920
3-hydroxyisobutyrate dehydrogenase-like protein.
     
  0.900
accA-2
Candidate Acetyl or propionyl-CoA carboxylase subunit.
  
 
 0.829
Rta_18250
Candidate propionyl-CoA carboxylase.
  
 
 0.816
bkdB
Candidate Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
     
 0.812
Rta_08490
Delta-ALA synthetase.
  
  
 0.802
Rta_05720
Unsaturated acyl-CoA reductaseButyryl dehydrogenase.
   
 
  0.801
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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