Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_37200Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
Rta_37220
Conserved hypothetical protein.
 
   
 0.955
Rta_37230
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
 
     0.918
melB
Candidate Na+/melibiose symporter.
 
     0.911
Rta_37170
NAD/FAD-binding protein-like protein.
 
     0.840
Rta_37180
Conserved hypothetical protein.
 
     0.836
Rta_37190
Cyclopropane-fatty-acyl-phospholipid synthase (Cyclopropane fatty acid synthase)-like protein.
 
     0.760
Rta_37150
Deoxyribodipyrimidine photolyase-like protein.
 
     0.498
Rta_23100
Conserved hypothetical protein.
  
     0.409
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.