Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Rta_37330Candidate membrane protein. (583 aa)    
Predicted Functional Partners:
Rta_37340
Type 4 fimbrial precursor PilA-like protein; Belongs to the N-Me-Phe pilin family.
 
   
 0.744
Rta_36560
Conserved hypothetical protein.
  
     0.503
Rta_02000
Conserved hypothetical protein.
  
     0.489
Rta_36710
Esterase-like protein.
  
     0.479
Rta_36720
Esterase-like protein.
  
     0.459
Rta_15680
D-(-)-3-hydroxybutyrate oligomer hydrolase-like protein.
  
     0.435
Rta_13580
Conserved hypothetical protein.
 
     0.426
Rta_10900
Candidate succinoglycan transport protein.
  
  
 0.418
Rta_08660
Transcriptional regulator, TetR family-like protein.
  
     0.413
Rta_20940
Conserved hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.404
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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