Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_373603',5'-cyclic-nucleotide phosphodiesterase (Cyclic AMP phosphodiesterase)-like protein. (263 aa)    
Predicted Functional Partners:
Rta_37350
Bifunctional protein : sensor, GAF domain; type 4 fimbrial assembly protein pilB, general secretion pathway protein E-like protein.
       0.804
Rta_37370
FHA-domain-containing proteins-like protein.
 
     0.774
Rta_37390
Protein kinase (serine/threonine-protein kinase)-like protein.
 
    0.718
Rta_08280
Conserved hypothetical protein; Belongs to the glucose-6-phosphate 1-epimerase family.
  
 
   0.669
Rta_15390
Candidate TPR domain protein.
  
 
   0.588
Rta_37340
Type 4 fimbrial precursor PilA-like protein; Belongs to the N-Me-Phe pilin family.
       0.561
Rta_37380
Protein phosphatase (Phosphoprotein phosphatase)-like protein.
 
     0.551
Rta_09570
Conserved hypothetical protein.
  
    0.474
Rta_27420
Conserved hypothetical protein.
  
     0.457
Rta_36290
Hypothetical protein.
 
     0.427
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.