Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
birACandidate bifunctional protein (BirA) : transcriptional regulator (Biotin operon repressor), BirA family; Biotin-- [acetyl-CoA-carboxylase] synthetase (Biotin--protein ligase). (260 aa)    
Predicted Functional Partners:
coaX
Bvg accessory factor-like protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
 
    0.913
accC
Candidate Biotin carboxylase (subunit of acetyl-CoA carboxylase); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.875
Rta_37520
Proteins containing SET domain-like protein.
       0.832
Rta_06650
Candidate Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
  
 0.829
accA-2
Candidate Acetyl or propionyl-CoA carboxylase subunit.
 
  
 0.826
Rta_37500
Conserved hypothetical protein.
       0.741
Rta_37490
Glutathione S-transferase-like protein.
     
 0.680
tadA
Candidate bifunctional protein : haloalkane dehalogenase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.673
fabD
Candidate [Acyl-carrier-protein] S-malonyltransferase.
 
   
 0.642
topA
Candidate type IA DNA topoisomerase.
  
    0.615
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.