Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_37840Candidate membrane protein. (219 aa)    
Predicted Functional Partners:
Rta_24850
Conserved hypothetical protein.
  
     0.554
Rta_16690
Candidate membrane protein.
  
     0.520
Rta_06430
Hypothetical protein.
  
     0.508
Rta_37850
Bifunctional protein : malic enzyme; phosphate acetyltransferase (phosphotransacetylase)-like protein; Belongs to the malic enzymes family.
       0.496
Rta_01000
Candidate membrane protein.
  
     0.465
Rta_37620
Cytochromes P450-like protein.
  
     0.462
Rta_27490
Potassium ion channel-like protein.
  
     0.453
Rta_02440
Conserved hypothetical protein.
  
     0.419
Rta_07830
Conserved hypothetical protein.
  
     0.417
Rta_24860
UDP- galactose 4-epimerase.
  
     0.408
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.