Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rta_06820 | Rta_07780 | Rta_06820 | Rta_07780 | Eukaryotic-type DNA primase-like protein. | ATP-dependent DNA ligase-like protein. | 0.931 |
Rta_06820 | Rta_37950 | Rta_06820 | Rta_37950 | Eukaryotic-type DNA primase-like protein. | Hypothetical protein. | 0.444 |
Rta_06820 | kulA | Rta_06820 | Rta_10200 | Eukaryotic-type DNA primase-like protein. | Candidate KU-like protein, YkoV-like family; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.870 |
Rta_07780 | Rta_06820 | Rta_07780 | Rta_06820 | ATP-dependent DNA ligase-like protein. | Eukaryotic-type DNA primase-like protein. | 0.931 |
Rta_07780 | Rta_37950 | Rta_07780 | Rta_37950 | ATP-dependent DNA ligase-like protein. | Hypothetical protein. | 0.643 |
Rta_07780 | Rta_37960 | Rta_07780 | Rta_37960 | ATP-dependent DNA ligase-like protein. | Hypothetical protein. | 0.705 |
Rta_07780 | kulA | Rta_07780 | Rta_10200 | ATP-dependent DNA ligase-like protein. | Candidate KU-like protein, YkoV-like family; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.945 |
Rta_37935 | Rta_37940 | Rta_37935 | Rta_37940 | Acylglycerol lipase-like protein. | Peptidases-like protein. | 0.630 |
Rta_37935 | Rta_37950 | Rta_37935 | Rta_37950 | Acylglycerol lipase-like protein. | Hypothetical protein. | 0.432 |
Rta_37935 | Rta_37960 | Rta_37935 | Rta_37960 | Acylglycerol lipase-like protein. | Hypothetical protein. | 0.432 |
Rta_37940 | Rta_37935 | Rta_37940 | Rta_37935 | Peptidases-like protein. | Acylglycerol lipase-like protein. | 0.630 |
Rta_37940 | Rta_37950 | Rta_37940 | Rta_37950 | Peptidases-like protein. | Hypothetical protein. | 0.548 |
Rta_37940 | Rta_37960 | Rta_37940 | Rta_37960 | Peptidases-like protein. | Hypothetical protein. | 0.601 |
Rta_37950 | Rta_06820 | Rta_37950 | Rta_06820 | Hypothetical protein. | Eukaryotic-type DNA primase-like protein. | 0.444 |
Rta_37950 | Rta_07780 | Rta_37950 | Rta_07780 | Hypothetical protein. | ATP-dependent DNA ligase-like protein. | 0.643 |
Rta_37950 | Rta_37935 | Rta_37950 | Rta_37935 | Hypothetical protein. | Acylglycerol lipase-like protein. | 0.432 |
Rta_37950 | Rta_37940 | Rta_37950 | Rta_37940 | Hypothetical protein. | Peptidases-like protein. | 0.548 |
Rta_37950 | Rta_37960 | Rta_37950 | Rta_37960 | Hypothetical protein. | Hypothetical protein. | 0.994 |
Rta_37950 | Rta_37970 | Rta_37950 | Rta_37970 | Hypothetical protein. | Hypothetical protein. | 0.459 |
Rta_37950 | Rta_37975 | Rta_37950 | Rta_37975 | Hypothetical protein. | Conserved hypothetical protein. | 0.448 |
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