Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_38170Candidate membrane component of K+ transport systems, Kef type; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (661 aa)    
Predicted Functional Partners:
kdsD
Candidate Arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.698
kdsC
Candidate 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
       0.683
rosB
Candidate NAD binding component of K+ transport system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.546
Rta_38130
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.539
Rta_12990
Candidate Na+/H+ and K+/H+ antiporter, NhaP type.
   
 
 0.467
Rta_25200
Candidate small-conductance mechanosensitive ion channel.
 
   
 0.450
gltB
Candidate Ferredoxin-dependent glutamate synthase.
  
  
 0.437
Rta_08370
Candidate membrane component of K+ transport systems, Kef type; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.430
Rta_28890
Candidate cation transport ATPase.
  
  
 0.430
ribAB
Candidate riboflavin biosynthesis bifunctional protein : GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.410
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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