STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373365_01238Unannotated protein. (386 aa)    
Predicted Functional Partners:
GCA_000373365_01305
Unannotated protein.
  
     0.558
GCA_000373365_01237
Unannotated protein.
  
    0.548
GCA_000373365_01239
Unannotated protein.
       0.512
GCA_000373365_06241
Unannotated protein.
   
   0.505
GCA_000373365_02165
Unannotated protein.
    
 0.500
GCA_000373365_03232
Unannotated protein.
    
   0.495
GCA_000373365_05372
Unannotated protein.
    
   0.495
GCA_000373365_05407
Unannotated protein.
    
   0.495
GCA_000373365_05408
Unannotated protein.
    
   0.495
GCA_000373365_03521
Unannotated protein.
  
     0.431
Your Current Organism:
Frankia discariae
NCBI taxonomy Id: 365528
Other names: CECT 9042, DSM 46785, F. discariae, Frankia discariae Nouioui et al. 2017, Frankia sp. BCU110501, strain BCU110501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.