STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ59294.1Carbamate kinase; Belongs to the carbamate kinase family. (311 aa)    
Predicted Functional Partners:
SIR26863.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.993
SIQ67234.1
L-glutamine synthetase.
     
 0.898
SIQ59317.1
Protein of unknown function.
 
 
 0.882
SIQ59335.1
Succinyl-CoA synthetase, alpha subunit.
 
  
 0.877
SIR13416.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.840
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.816
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
     
 0.804
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
     
 0.803
pyrI
Aspartate carbamoyltransferase regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
 
  
  0.785
SIQ46393.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
  
 0.738
Your Current Organism:
Shewanella morhuae
NCBI taxonomy Id: 365591
Other names: NBRC 100978, S. morhuae, Shewanella morhuae Satomi et al. 2006 emend. Thorell et al. 2019, strain U1417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.