Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ88155.1 | SIQ88180.1 | SAMN05421840_105122 | SAMN05421840_105123 | Protein of unknown function. | Outer membrane transport energization protein ExbB. | 0.965 |
SIQ88155.1 | SIQ88206.1 | SAMN05421840_105122 | SAMN05421840_105124 | Protein of unknown function. | Outer membrane transport energization protein ExbB. | 0.959 |
SIQ88155.1 | SIQ88223.1 | SAMN05421840_105122 | SAMN05421840_105125 | Protein of unknown function. | Outer membrane transport energization protein ExbD. | 0.933 |
SIQ88155.1 | SIQ88253.1 | SAMN05421840_105122 | SAMN05421840_105126 | Protein of unknown function. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.947 |
SIQ88155.1 | SIQ88275.1 | SAMN05421840_105122 | SAMN05421840_105127 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.940 |
SIQ88155.1 | SIR00761.1 | SAMN05421840_105122 | SAMN05421840_10748 | Protein of unknown function. | TonB family C-terminal domain-containing protein. | 0.703 |
SIQ88155.1 | SIR39730.1 | SAMN05421840_105122 | SAMN05421840_11947 | Protein of unknown function. | Outer membrane receptor proteins, mostly Fe transport. | 0.557 |
SIQ88180.1 | SIQ88155.1 | SAMN05421840_105123 | SAMN05421840_105122 | Outer membrane transport energization protein ExbB. | Protein of unknown function. | 0.965 |
SIQ88180.1 | SIQ88206.1 | SAMN05421840_105123 | SAMN05421840_105124 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbB. | 0.958 |
SIQ88180.1 | SIQ88223.1 | SAMN05421840_105123 | SAMN05421840_105125 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbD. | 0.997 |
SIQ88180.1 | SIQ88253.1 | SAMN05421840_105123 | SAMN05421840_105126 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.995 |
SIQ88180.1 | SIQ88275.1 | SAMN05421840_105123 | SAMN05421840_105127 | Outer membrane transport energization protein ExbB. | Tetratricopeptide repeat-containing protein. | 0.941 |
SIQ88180.1 | SIR00761.1 | SAMN05421840_105123 | SAMN05421840_10748 | Outer membrane transport energization protein ExbB. | TonB family C-terminal domain-containing protein. | 0.936 |
SIQ88180.1 | SIR29176.1 | SAMN05421840_105123 | SAMN05421840_11471 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein TonB. | 0.923 |
SIQ88180.1 | SIR29210.1 | SAMN05421840_105123 | SAMN05421840_11473 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbD. | 0.948 |
SIQ88180.1 | SIR39730.1 | SAMN05421840_105123 | SAMN05421840_11947 | Outer membrane transport energization protein ExbB. | Outer membrane receptor proteins, mostly Fe transport. | 0.739 |
SIQ88180.1 | tolR | SAMN05421840_105123 | SAMN05421840_105210 | Outer membrane transport energization protein ExbB. | Cell division and transport-associated protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.965 |
SIQ88206.1 | SIQ88155.1 | SAMN05421840_105124 | SAMN05421840_105122 | Outer membrane transport energization protein ExbB. | Protein of unknown function. | 0.959 |
SIQ88206.1 | SIQ88180.1 | SAMN05421840_105124 | SAMN05421840_105123 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbB. | 0.958 |
SIQ88206.1 | SIQ88223.1 | SAMN05421840_105124 | SAMN05421840_105125 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbD. | 0.999 |
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