Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ57988.1 | SIQ58096.1 | SAMN05421840_102215 | SAMN05421840_102220 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase /prephenate dehydratase. | Chorismate mutase /prephenate dehydrogenase. | 0.999 |
SIQ57988.1 | SIR29884.1 | SAMN05421840_102215 | SAMN05421840_114103 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase /prephenate dehydratase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.401 |
SIQ57988.1 | SIR41792.1 | SAMN05421840_102215 | SAMN05421840_1217 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase /prephenate dehydratase. | Predicted arabinose efflux permease, MFS family. | 0.509 |
SIQ58096.1 | SIQ57988.1 | SAMN05421840_102220 | SAMN05421840_102215 | Chorismate mutase /prephenate dehydrogenase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase /prephenate dehydratase. | 0.999 |
SIQ58096.1 | SIR29884.1 | SAMN05421840_102220 | SAMN05421840_114103 | Chorismate mutase /prephenate dehydrogenase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.511 |
SIQ58096.1 | SIR41792.1 | SAMN05421840_102220 | SAMN05421840_1217 | Chorismate mutase /prephenate dehydrogenase. | Predicted arabinose efflux permease, MFS family. | 0.570 |
SIR29884.1 | SIQ57988.1 | SAMN05421840_114103 | SAMN05421840_102215 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase /prephenate dehydratase. | 0.401 |
SIR29884.1 | SIQ58096.1 | SAMN05421840_114103 | SAMN05421840_102220 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Chorismate mutase /prephenate dehydrogenase. | 0.511 |
SIR29884.1 | SIR41792.1 | SAMN05421840_114103 | SAMN05421840_1217 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Predicted arabinose efflux permease, MFS family. | 0.489 |
SIR41780.1 | SIR41792.1 | SAMN05421840_1216 | SAMN05421840_1217 | Putative salt-induced outer membrane protein. | Predicted arabinose efflux permease, MFS family. | 0.433 |
SIR41792.1 | SIQ57988.1 | SAMN05421840_1217 | SAMN05421840_102215 | Predicted arabinose efflux permease, MFS family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase /prephenate dehydratase. | 0.509 |
SIR41792.1 | SIQ58096.1 | SAMN05421840_1217 | SAMN05421840_102220 | Predicted arabinose efflux permease, MFS family. | Chorismate mutase /prephenate dehydrogenase. | 0.570 |
SIR41792.1 | SIR29884.1 | SAMN05421840_1217 | SAMN05421840_114103 | Predicted arabinose efflux permease, MFS family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.489 |
SIR41792.1 | SIR41780.1 | SAMN05421840_1217 | SAMN05421840_1216 | Predicted arabinose efflux permease, MFS family. | Putative salt-induced outer membrane protein. | 0.433 |