Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lytAN-acetylmuramoyl-L-alanine amidase LytA; COG5263, glucan-binding domain (YG repeat). (318 aa)    
Predicted Functional Partners:
smi_0477
Antiholin.
       0.773
cbp14
Choline binding protein Cbp14; COG5263, glucan-binding domain (YG repeat).
  
     0.757
cbp12
Choline binding protein cbp12; COG5263, glucan-binding domain (YG repeat).
  
   
 0.745
smi_0476
Hypothetical protein.
       0.742
smi_0474
Conserved hypothetical protein.
       0.741
smi_0475
Conserved hypothetical protein.
       0.741
cbp7
Choline binding protein Cbp7; COG5263, glucan binding domain (YG repeat).
  
     0.736
cbp13
COG5263, glucan-binding domain (YG repeat).
  
     0.728
cbp10
Choline binding protein Cbp10; COG5263, glucan binding domain (YG repeat).
  
     0.724
cbp6
Choline binding protein Cbp6; COG5263, glucan binding domain (YG repeat).
  
     0.717
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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