Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smi_0549Acetyltransferase, GNAT family; COG1670, acetyltransferases, including N-acetylases of ribosomal proteins. (162 aa)    
Predicted Functional Partners:
smi_0548
Type II secretory pathway, prepilin signal peptidase; COG1989.
  
    0.681
cbp3
Choline binding protein Cbp3; COG5263, glucan-binding domain (YG repeat).
  
     0.547
smi_1928
Conserved hypothetical protein; COG1619, homologs of microcin C7 resistance protein MccF.
 
     0.546
cbp5
Choline-binding protein Cbp5; COG5263, glucan-binding domain (YG repeat).
  
     0.520
cbp8
Choline-binding protein Cbp8; COG5263, glucan-binding domain (YG repeat).
  
     0.513
cbp4
Choline binding protein Cbp4; COG5263, glucan-binding domain (YG repeat).
  
     0.485
smi_1603
Conserved hypothetical protein.
  
    0.475
cbp14
Choline binding protein Cbp14; COG5263, glucan-binding domain (YG repeat).
  
     0.466
smi_1496
Acetyltransferase GNAT family.
 
    0.459
cbp2
Choline binding protein Cbp2; COG5263, glucan-binding domain (YG repeat).
  
     0.450
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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