STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
smi_0640Metallo-beta-lactamase superfamily protein; COG0491, Zn-dependent hydrolases. (177 aa)    
Predicted Functional Partners:
smi_0962
COG0346, GloA, lactoylglutathione lyase and related lyases.
  
 0.960
nox
NADH oxidase.
  
 0.803
cysE
Serine acetyltransferase; COG1045.
      
 0.604
smi_1575
Conserved hypothetical protein.
  
 
 0.525
smi_1351
Conserved hypothetical protein.
 
     0.503
rex
Conserved hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
     
 0.494
groES
CH10_SMI 10 kDa chaperonin (protein Cpn10); Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
    
 
 0.485
dinG
ATP-dependent helicase DinG; 3'-5' exonuclease.
       0.461
smi_1350
Conserved hypothetical protein.
       0.461
smi_1527
Aspartate/tyrosine/aromatic aminotransferase; Unknown EC_number=2.6.1.-; COG0436.
  
    0.459
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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