Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
salYABC transporter, permease; COG0577, ABC-type antimicrobial peptide transport system, permease component. (419 aa)    
Predicted Functional Partners:
salX
ABC transporter, ATP-binding protein; COG1136, ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.999
acrA
Conserved hypothetical protein; COG0845, efflux transporter.
 
 
 0.998
smi_1970
ABC transporter ATP-binding protein; COG1136, antimicrobial peptide transport system, ATPase component.
 
 0.993
smi_1450
ABC transporter, ATP-binding protein.
 
 0.979
smi_1076
ABC transporter, ATP-binding protein; COG1136, ABC-type antimicrobial peptide transport system, ATPase component.
   0.941
smi_1460
ABC-type antimicrobial peptide transport system, ATPase component; COG1136.
   0.941
smi_0836
ABC transporter, ATP-binding protein; COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component.
   0.918
smi_0631
ABC-ttansporter, ATP binding protein, antimicrobial peptide transport system; COG1136.
 
   0.902
smi_0397
ABC transporter, ATP-binding protein.
   0.887
vex2
ABC transporter ATP-binding protein.
 
   0.865
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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