smi_1172 protein (Streptococcus mitis) - STRING interaction network

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[Homology]

Score

smi_1172

ABC transporter ATP-binding protein-unknown substrate; COG0488, ATPase components of ABC transporters with duplicated ATPase domains. (633 aa)

Predicted Functional Partners:

mutR

0.844

rplU

0.807

rpsC

0.804

rplC

0.804

rplP

0.803

rpsO

0.801

rplD

0.801

rpmD

0.800

rpmH

0.799

rpsS

0.797

Your Current Organism:

Streptococcus mitis

NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
mutR	smi_1172	smi_1171	smi_1172	Transcriptional regulator; Cd00093, helix-turn-helix XRE-family.	ABC transporter ATP-binding protein-unknown substrate; COG0488, ATPase components of ABC transporters with duplicated ATPase domains.	0.844
rplC	rplD	smi_1905	smi_1904	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplP	smi_1905	smi_1898	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplC	rplU	smi_1905	smi_0926	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.991
rplC	rpmD	smi_1905	smi_1887	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L30.	0.997
rplC	rpmH	smi_1905	smi_0290	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.966
rplC	rpsC	smi_1905	smi_1899	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsO	smi_1905	smi_0656	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.984
rplC	rpsS	smi_1905	smi_1901	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplC	smi_1172	smi_1905	smi_1172	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ABC transporter ATP-binding protein-unknown substrate; COG0488, ATPase components of ABC transporters with duplicated ATPase domains.	0.804
rplD	rplC	smi_1904	smi_1905	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.999
rplD	rplP	smi_1904	smi_1898	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplD	rplU	smi_1904	smi_0926	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplD	rpmD	smi_1904	smi_1887	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L30.	0.998
rplD	rpmH	smi_1904	smi_0290	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.967
rplD	rpsC	smi_1904	smi_1899	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplD	rpsO	smi_1904	smi_0656	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplD	rpsS	smi_1904	smi_1901	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplD	smi_1172	smi_1904	smi_1172	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	ABC transporter ATP-binding protein-unknown substrate; COG0488, ATPase components of ABC transporters with duplicated ATPase domains.	0.801
rplP	rplC	smi_1898	smi_1905	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.999

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