Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
tacFTeichoic acid subunit flippase; COG2244, Membrane protein involved in the export of O-antigen and teichoic acid. (495 aa)    
Predicted Functional Partners:
glf
UDP-galactopyranose mutase.
 
  
 0.901
licD2
Phosphorylcholine transferase LicD2; Pfam04991.
 
   
 0.870
licD1
Phosphorylcholine transferase LicD1; Pfam04991.
 
   
 0.862
smi_0538
Conserved hypothetical protein; COG2148, WcaJ, sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.755
licB
Choline transport protein.
 
  
 0.751
tarJ
Alcohol dehydrogenase; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.
 
  
 0.747
licD3
Phosphorylcholine transferase LicD3; Pfam04991.
 
   
 0.737
smi_0513
Conserved hypothetical protein; COG3307, RfaL, lipid A core - O-antigen ligase and related enzymes.
 
  
 0.676
wecE
Capsular polysaccharide biosynthesis protein; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis COG0399; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.668
smi_1982
Nucleoside-diphosphate sugar isomerase; COG1086.
 
  
 0.618
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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