Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smi_1382ABC transporter membrane-spanning permease-aspartate/glutamate transport; COG0765, ABC-type amino acid transport system, permease component. (266 aa)    
Predicted Functional Partners:
smi_1381
ABC transporter ATP-binding protein-aspartate/glutamate transport; COG1126, ABC-type polar amino acid transport system, ATPase component.
 
 0.999
smi_1946
ABC transporter substrate-binding lipoprotein; Pfam00497, bacterial extracellular solute-binding proteins, duplication of smi_1945.
 0.983
smi_1945
ABC transporter substrate-binding lipoprotein; Pfam00497, bacterial extracellular solute-binding proteins.
 0.982
smi_1969
ABC transporter substrate-binding protein; Pfam00497, bacterial extracellular solute-binding proteins, family 3.
 
 0.978
smi_0738
ABC transporter substrate-binding lipoprotein; COG0834.
 
 0.965
smi_1579
ABC transporter substrate-binding lipoprotein; COG0834.
 
 0.948
glnQ
ABC transporter ATP-binding protein-glutamine transport; COG1126.
 
 
 0.908
smi_1297
ABC transporter substrate binding lipoprotein-amino acid transport; COG0834.
 
 0.880
smi_0868
COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component.
 
 
 0.872
smi_1438
ABC transporter ATP-binding protein-amino acid transport; COG1126.
 
 
 0.867
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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