Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smi_1398Serine protease; LPXTG motif; pfam00082, subtilase family; Belongs to the peptidase S8 family. (1699 aa)    
Predicted Functional Partners:
prtA
Cell wall-associated serine proteinase; LPXTG motif.
 
 
0.602
smi_1622
Serine/threonine protein kinase; COG2815.
   
 
 0.602
pgdA
Peptidoglycan GlcNAc deacetylase.
 
   
 0.595
htrA
COG0265, trypsin-like serine proteases.
   
  
 0.562
smi_0630
Conserved hypothetical protein.
 
 
 0.547
zmpB
Zinc metalloprotease; LPXTG motif.
 
  
 0.536
smi_1531
Cell wall surface anchor family protein; LPXTG motif; G5 domain family protein, collagen-like.
  
 
 0.497
smi_0636
Manganese ABC transporter, ATP-binding protein.
   
  
 0.496
smi_0474
Conserved hypothetical protein.
  
 
 0.480
smi_0031
Conserved hypothetical protein.
  
     0.472
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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