Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smi_1496Acetyltransferase GNAT family. (136 aa)    
Predicted Functional Partners:
smi_1495
Hypothetical protein.
       0.634
smi_1497
Amino acid permease; COG113.
       0.567
argG
Argininosuccinate synthase; COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.563
purL
Phosphoribosylformylglycinamide synthetase.
     
 0.485
smi_0549
Acetyltransferase, GNAT family; COG1670, acetyltransferases, including N-acetylases of ribosomal proteins.
 
    0.459
smi_1493
Conserved hypothetical protein.
       0.445
birA
Bifunctional protein, biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
       0.423
cinA
Damage inducible protein CinA; COG1058, CinA, predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA.
       0.420
smi_1494
Conserved hypothetical protein; COG1476, COG1476, predicted transcriptional regulators.
       0.410
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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