Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smi_1779Oligopeptide permease; COG3104, PTR2, Dipeptide/tripeptide permease, proton-dependent transport. (501 aa)    
Predicted Functional Partners:
pepX
Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
 
   
 0.623
smi_0639
Peptidase M13 superfamily; COG3590, metalloendopeptidase.
 
  
 0.596
pepN
Aminopeptidase N.
  
 
 0.595
smi_1577
Peptidase M20 superfamily.
      
 0.540
pepP
COG0006, Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
  
  
 0.532
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
      
 0.530
smi_1144
Amino acid permease family protein; COG0531.
  
 
 
 0.478
pepF
Oligoendopeptidase F.
     
 0.473
pepQ
X-Pro dipeptidase.
  
  
 0.441
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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