Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cbp14Choline binding protein Cbp14; COG5263, glucan-binding domain (YG repeat). (498 aa)    
Predicted Functional Partners:
cbp3
Choline binding protein Cbp3; COG5263, glucan-binding domain (YG repeat).
  
     0.774
cbp4
Choline binding protein Cbp4; COG5263, glucan-binding domain (YG repeat).
  
     0.773
lytA
N-acetylmuramoyl-L-alanine amidase LytA; COG5263, glucan-binding domain (YG repeat).
  
     0.757
licA
Choline kinase.
  
     0.754
smi_1876
Conserved hypothetical protein.
       0.746
smi_1877
Conserved hypothetical protein.
       0.746
licC
CTP:phosphocholine cytidylyltransferase.
  
     0.646
licD3
Phosphorylcholine transferase LicD3; Pfam04991.
  
     0.644
licB
Choline transport protein.
  
     0.584
licD2
Phosphorylcholine transferase LicD2; Pfam04991.
  
     0.574
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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