STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
smi_1920Conserved hypothetical protein; Belongs to the UPF0297 family. (88 aa)    
Predicted Functional Partners:
smi_1919
Holiday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
 
    0.972
smi_1918
Conserved hypothetical protein; Belongs to the UPF0473 family.
  
  
 0.861
smi_0377
Nucleic-acid-binding protein implicated in transcription termination.
  
   
 0.777
smi_1921
Conserved hypothetical protein; Membrane bound lipoprotein.
       0.741
smi_0664
Bcl-2 family protein; COG2384, SAM-dependent methyltransferase.
  
     0.723
smi_1253
Conserved hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.680
arsC
COG1393, arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
  
    0.673
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.661
smi_1155
Conserved hypothetical protein; COG4109, predicted transcriptional regulator containing CBS domains.
      
 0.613
smi_2070
Conserved hypothetical protein.
      
 0.613
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.