Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
smi_1994COG0395, UgpE, ABC-type sugar transport system. (307 aa)    
Predicted Functional Partners:
smi_1995
ABC transporter permease, sugar transport; COG1175; ABC-type polysaccharide transport system.
 
 
 0.995
smi_1993
ABC transporter substrate-binding protein.
 
 0.992
smi_1592
ABC transporter ATP-binding protein multiple sugar transport; COG3839; Belongs to the ABC transporter superfamily.
 
 
 0.969
malC
malC-protein, ABC transporter membrane-spanning permease-maltose/maltodextrin.
 
 
 0.900
smi_1998
COG0383, alpha-mannosidase.
 
   
 0.880
smi_1996
Glycosyl hydrolase family 20 (GH20) protein.
 
   
 0.851
smi_0603
ABC transporter, sugar transporter, sugar binding lipoprotein-N-acetylneuraminate-binding protein.
 
 
 0.844
smi_0604
ABC transporter permease-sugar transport, N-acetylneuraminate transport system.
 
 
0.799
smi_1999
Conserved hypothetical protein.
 
   
 0.785
smi_1939
Conserved hypothetical protein; COG5578, predicted integral membrane proteins.
 
  
 0.741
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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