Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
smi_2015Transcriptional regulator; Cd00093, helix-turn-helix XRE-family like proteins. (141 aa)    
Predicted Functional Partners:
smi_2016
COG2865, predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
       0.501
smi_2014
COG1476, predicted transcriptional regulator.
       0.490
smi_2017
Phage-related integrase, recombinase; Cd01189, phiLC3 phage and phage-related integrases, site-specific recombinases; Belongs to the 'phage' integrase family.
 
    0.490
smi_2013
Phage-related protein; COG3646, uncharacterized phage-encoded protein.
       0.475
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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