Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
smi_2021Beta-galactosidase/beta-glucuronidase, truncated; COG3250; Belongs to the glycosyl hydrolase 2 family. (821 aa)    
Predicted Functional Partners:
smi_1537
N-acetyl-beta-hexosaminidase; COG3525, LPXTG motif.
 
 0.967
bgaC
Beta-galactosidase 3; Belongs to the glycosyl hydrolase 35 family.
 
 0.943
nanA
Sialidase A (neuraminidase A); LPXTG motif.
 
  
 0.926
smi_1996
Glycosyl hydrolase family 20 (GH20) protein.
  
 0.913
lacE
PTS system, lactose-specific IIBC component.
     
 0.910
smi_2019
Fucosidase; COG3669, alpha-L-fucosidase.
 
   
 0.906
bgaA
Beta-galactosidase; LPXTG motif.
  
  
 
0.902
lacF
PTS system, lactose-specific IIA component.
     
  0.900
glk
Glucose kinase; COG1940.
     
  0.900
smi_2020
Hypothetical protein.
     0.899
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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