STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G024680Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
Csa_3G829090
Alpha-mannosidase.
     
 0.956
Csa_7G447810
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 0.953
Csa_7G031700
Uncharacterized protein.
      
 0.592
Csa_7G396360
Uncharacterized protein.
      
 0.572
Csa_2G238800
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
      
 0.568
Csa_3G764550
Uncharacterized protein.
      
 0.563
Csa_7G071420
RING-type domain-containing protein.
      
 0.559
Csa_6G052100
Uncharacterized protein.
      
 0.559
Csa_6G523340
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.558
Csa_5G210000
Uncharacterized protein.
      
 0.535
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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